MOMD:
Mouse Oral Microbiome Database
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MOMD Genome Explorer
Selected genome:
Mammaliicoccus sciuri
19428wE1_BL01
Change genome:
Available genomes
1. Actinomyces bowdenii WMus004.1
2. Bacteroides acidifaciens 19428wH3_P2318
3. Bacteroides acidifaciens 8_33DSS_C5_S8
4. Citrobacter koseri 19428wH4_BL23
5. Dysgonomonas mossii 19428wE4_P11
6. Enterococcus gallinarum 19428wB3_C2
7. Enterococcus gallinarum ENT.1
8. Escherichia coli 19428wD4_HM13
9. Gemella palaticanis CIP106318T.1
10. Gemella sp. 19428wG2_WT2a
11. Gemella sp. GH3.1
12. Gemella sp. GL1.1
13. Granulicatella sp. 19428wC4_WM01
14. Jeotgalicoccus nanhaiensis 19428wE5_W307
15. Lactobacillus johnsonii 19428wE2_CC3
16. Lactobacillus murinus LAC.1
17. Ligilactobacillus murinus 19428wF2_HT12
18. Ligilactobacillus murinus 2_2BalbC1BO2_S2
19. Mammaliicoccus lentus 19428wC1_HT5
20. Mammaliicoccus lentus 19428wG1_AE2
21. Mammaliicoccus lentus 3_3BalbC2O2_S3
22. Mammaliicoccus sciuri 19428wE1_BL01
23. Mammaliicoccus sciuri ACT.1
24. Microbacterium paludicola 19428wA4_P1012
25. Micrococcus aloeverae 19428wE3_DK2
26. Micrococcus yunnanensis 19428wG4_IOV6
27. Muribacter muris 19428wC3_WT12
28. Muribacter muris 7_18CXCR221ANO_S7
29. Neisseria sp. 19428wB4_WF04
30. Parabacteroides goldsteinii 19428wG3_P14
31. Pasteurella sp. 19428wF3_WM03
32. Proteus mirabilis 19428wB5_irhom_Sw
33. Providencia alcalifaciens WMus003.1
34. Rothia nasimurium 19428wA5_irhom_31
35. Sanguibacter inulinus DSM100099.1
36. Shigella flexneri 19428wH2_1568
37. Staphylococcus arlettae 19428wH1_IOV5
38. Staphylococcus aureus 19428wD1_P36
39. Staphylococcus aureus 4_5BalbC4O2_S4
40. Staphylococcus aureus STF.1
41. Staphylococcus capitis GW2.1
42. Staphylococcus saprophyticus 19428wB1_WM06
43. Staphylococcus warneri 19428wF1_P912
44. Staphylococcus xylosus 19428wA1_WT6
45. Streptococcus acidominimus 19428wB2_HT4
46. Streptococcus acidominimus 6_8CXCR23O2_S6
47. Streptococcus cuniculi 19428wD2_WM131
48. Streptococcus danieliae 1_1BalbC1O2_S1
49. Streptococcus danieliae STR.1
50. Streptococcus sp. 19428wA2_WM07
51. Streptococcus sp. 19428wC2_LYSM12
52. Streptococcus sp. 19428wD3_AN2
from a total of 52 genomes
Available tools:
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PROKKA Annotation
NCBI Annotation
BLAST Against Genome
Genome Info
Taxon Description
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PROKKA Genome Annotation:
contigs: 24
bases: 2,837,491 bps
CDS: 2,819
rRNA: 9
Repeat region:
tmRNA: 1
tRNA: 59
misc RNA:
Total features: 2,888
Total number of protein coding genes annotated/found:
2,819
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Items 1 - 20
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Molecule ^
PID/GenBank ID *
Sequences
Size (NA/AA) ^
Range ^
Gene Product Name
SEQF5031|JADGMG010000001.1
SEQF5031_00006
Genome Viewer
NA
AA
1884/628
352-2235
hypothetical protein
SEQF5031|JADGMG010000001.1
SEQF5031_00007
Genome Viewer
NA
AA
1389/463
3651-2263
HTH-type transcriptional regulatory protein GabR
SEQF5031|JADGMG010000001.1
SEQF5031_00008
Genome Viewer
NA
AA
888/296
3763-4650
Pyridoxal 5'-phosphate synthase subunit PdxS
SEQF5031|JADGMG010000001.1
SEQF5031_00009
Genome Viewer
NA
AA
576/192
4652-5227
Pyridoxal 5'-phosphate synthase subunit PdxT
SEQF5031|JADGMG010000001.1
SEQF5031_00010
Genome Viewer
NA
AA
1254/418
6536-5283
Nucleoside permease NupC
SEQF5031|JADGMG010000001.1
SEQF5031_00011
Genome Viewer
NA
AA
462/154
6679-7140
Transcriptional regulator CtsR
SEQF5031|JADGMG010000001.1
SEQF5031_00012
Genome Viewer
NA
AA
537/179
7155-7691
Protein-arginine kinase activator protein
SEQF5031|JADGMG010000001.1
SEQF5031_00013
Genome Viewer
NA
AA
1008/336
7692-8699
Protein-arginine kinase
SEQF5031|JADGMG010000001.1
SEQF5031_00014
Genome Viewer
NA
AA
2463/821
8716-11178
ATP-dependent Clp protease ATP-binding subunit ClpC
SEQF5031|JADGMG010000001.1
SEQF5031_00015
Genome Viewer
NA
AA
1371/457
11334-12704
DNA repair protein RadA
SEQF5031|JADGMG010000001.1
SEQF5031_00016
Genome Viewer
NA
AA
1059/353
12727-13785
putative PIN and TRAM-domain containing protein YacL
SEQF5031|JADGMG010000001.1
SEQF5031_00017
Genome Viewer
NA
AA
687/229
13787-14473
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
SEQF5031|JADGMG010000001.1
SEQF5031_00018
Genome Viewer
NA
AA
480/160
14466-14945
2-C-methyl-D-erythritol 2%2C4-cyclodiphosphate synthase
SEQF5031|JADGMG010000001.1
SEQF5031_00019
Genome Viewer
NA
AA
1455/485
14961-16415
Glutamate--tRNA ligase
SEQF5031|JADGMG010000001.1
SEQF5031_00020
Genome Viewer
NA
AA
642/214
16671-17312
Serine acetyltransferase
SEQF5031|JADGMG010000001.1
SEQF5031_00021
Genome Viewer
NA
AA
1404/468
17296-18699
Cysteine--tRNA ligase
SEQF5031|JADGMG010000001.1
SEQF5031_00022
Genome Viewer
NA
AA
411/137
18692-19102
Mini-ribonuclease 3
SEQF5031|JADGMG010000001.1
SEQF5031_00023
Genome Viewer
NA
AA
747/249
19095-19841
Putative TrmH family tRNA/rRNA methyltransferase
SEQF5031|JADGMG010000001.1
SEQF5031_00024
Genome Viewer
NA
AA
519/173
19841-20359
putative protein YacP
SEQF5031|JADGMG010000001.1
SEQF5031_00025
Genome Viewer
NA
AA
615/205
20437-21051
hypothetical protein
Items 1 - 20
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* Click GI, UID, Gene Product to go to NCBI record
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Copyright 2020 Forsyth Institute
Page last updated: July 7, 2021 08:39:35
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